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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015875398.1_cds_XP_016435790.1_31714
CDS Infomation

[gene=LOC107762002] [db_xref=GeneID:107762002] [protein=putative clathrin assembly protein At5g57200] [protein_id=XP_016435790.1] [location=join(20479..20604,20974..21112,21235..21362,21455..21547,21828..21878,22127..22192,22280..22345,22444..22524,22607..22687,23107..23292,23397..23472,23597..23718,23837..24253)] [gbkey=CDS]
Sequence

ATGGGGTTTCCCTTAATTAATATTCCAGAGATTGCTGTTGCAACATCGATAACATGCCCA
CGAGCAGATGTTGCCTACTGCATTCATGCACTTAACAGACGATTGTCAAAGACACGCAAT
TGGATTGTTGTGATAAAGACGCTGATAGTTATTCATAGGGTGTTGCGAGAAGGCGATCCT
TCATTCAGGGAGGAACTACTCCGCTACTCTCAAAGAGGGCATATTTTTCAACTATCAAAC
TTCAAGGATGACTCAAGTCCTCTTGCTTGGGATTGCTCAGCCTGGGTAAGGACATACGCG
CTCTTTCTGGAGGAAAGACTCGAGTGCTTTAGGACTTTAAAATATGATATTGAGGCAGAA
AGATTGACCAAAACTTCAGCTGGAGCAGACAAGGTGCATTGCAGAACAAGGCTTTTGAAT
GGCGAAGAACTTTTAGAGCAGCTCCCAGCATTACAGCAGCTTCTGTATCGCTTAACTGGT
TGCCAGCCTGAAGGAGGAGCTTGCTATAACTTTCTCATTCAGTATGCCTTGGCTCTGGTG
TTGAAGGAGAGTTTTAAGATCTATTGTGCAATCAACGATGGGATAATCAATCTTGTGGAC
TTTTTTTTTGAGATGTCCAAGCATGATGCTATAAAAGCTCTCGACATATACAAACGAGCT
GGGCAACAGGCTGAAAATCTAGCTCATTTTTATGACTTCTGCAGAGGCTTGGATATAGCT
CGAACCTTTCAATTTCCCACATTGAAACAGCCTCCTACTTCGTTTCTGGCAACGATGGAG
GAATACATTAGAGAAGCACCTCAAACGGGCTCAATGCCAAATAATAGGCTGGAGTATCAA
GAAACCAAGAAGAAACCTGAAAAGCCTGAAGAGCCTTTACCTGAAGTAAGGGAAAAACAA
GTTGAAGAAGCTAAAACTAATAAAGTAACACAGGTTGAAGCACAAAACGAAACACTACCT
GTGAAAGAGGAAGAAACCCCACCACTGATATCAAGAGAAGAGCCTGCTGATTTGCTGGGT
TTGAATCAACTGGATCCAAGAGTTGCAGAATTAGAGGAAAACAATGCATTGGCTCTTGCA
ATCATACCGCCTGGCAAAGAAAATCTATCAGCTAATTATCAAGCGAGTGAAACTGGAAAA
ACATCAGGTTGGGAATTGGCTCTTCTTACAGCACCAAGTAACAATAGAAGCCAAATTGCA
CCAGATAAGAAATTGGCTGGAGGATTCGACAAGCTACTACTCGACAGTTTATATGAAGAC
GATGTATCCAGGAGGCAAATACAGCTGCAACAAGCTGGCTACAGCGTGGGGTATGGGTAT
GAAATGCCTGGACAGAGTTCAATCAATCACGATGACCCCTTTGCAATGTCAAATCACATA
GCCCCTCCAACAAACGTACAAATGCTAGTGTCTCAGCAGCAACAACAGCAAATGATGCAA
CAGCAGCAGATGATGCAACAACAGCACATGATGCTACAGCAGCAGCAGCCACAACAAAAT
ATGATGATGGTACAATATCAACACCAATATTCTCAACAAACGTGGTACATGGGATCTTCC
AACCCATTCGGAGATCCTTTAAGTTATCCACCAAGCGCCATGCCACCACAGAGAAACCAT
CCTTTGATTTAG

Peptide Sequence

PEP ID

XP_016435790.1
PEP Infomation

PREDICTED: putative clathrin assembly protein At5g57200 [Nicotiana tabacum]
Sequence

MGFPLINIPEIAVATSITCPRADVAYCIHALNRRLSKTRNWIVVIKTLIVIHRVLREGDP
SFREELLRYSQRGHIFQLSNFKDDSSPLAWDCSAWVRTYALFLEERLECFRTLKYDIEAE
RLTKTSAGADKVHCRTRLLNGEELLEQLPALQQLLYRLTGCQPEGGACYNFLIQYALALV
LKESFKIYCAINDGIINLVDFFFEMSKHDAIKALDIYKRAGQQAENLAHFYDFCRGLDIA
RTFQFPTLKQPPTSFLATMEEYIREAPQTGSMPNNRLEYQETKKKPEKPEEPLPEVREKQ
VEEAKTNKVTQVEAQNETLPVKEEETPPLISREEPADLLGLNQLDPRVAELEENNALALA
IIPPGKENLSANYQASETGKTSGWELALLTAPSNNRSQIAPDKKLAGGFDKLLLDSLYED
DVSRRQIQLQQAGYSVGYGYEMPGQSSINHDDPFAMSNHIAPPTNVQMLVSQQQQQQMMQ
QQQMMQQQHMMLQQQQPQQNMMMVQYQHQYSQQTWYMGSSNPFGDPLSYPPSAMPPQRNH
PLI

Transcript Sequence

Gene sequence data has not been registered.